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Peptide record

TPDB49913

Antifungal standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB49913
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 17-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
KQCHKKGGHCFPKEKIC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C85H139N27O21S3
ARNDLMSTWYV
K
1971.39
9.67
7
1
2
+4
2.11
-1.206
22.94
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
125
0.06
4
Residue Composition
number
0
A
0
R
0
N
0
D
3
C
1
E
1
Q
2
G
2
H
1
I
0
L
5
K
0
M
1
F
1
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 3 E: 1 Q: 1 G: 2 H: 2 I: 1 L: 0 K: 5 M: 0 F: 1 P: 1 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
17 reviewed residue count
C85H139N27O21S3 sequence-only estimate (linear, free termini)
1971.39 sequence-only estimate (linear, free termini)
9.67 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.11 sequence-only estimate (linear, free termini)
-1.206 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.