TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB49908

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP

Sequence_Type

modified_plain

Has_Modification Yes

Description A 10-aa modified antifungal peptide sequence curated from dbAMP, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

EXYTEVPQYV

FASTA

>TPDB49908|Antifungal|length=10
EXYTEVPQYV

Formula C52H74N10O18

Absent Amino Acids ARNDCGHILKMFSW

Common Amino Acids EYV

Mass 1127.22

PI 3.13

Basic Residues 0

Acidic Residues 2

Hydrophobic Residues 4

Net Charge -2

Boman Index 3.47

Hydrophobicity -0.700

Aliphatic Index 58.00

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 264.37

Polar Residues 4

number

0

A

0

R

0

N

0

D

0

C

2

E

1

Q

0

G

0

H

0

I

0

L

0

K

0

M

0

F

1

P

0

S

1

T

0

W

2

Y

2

V

Amino Acid Distribution

A: 0 R: 0 N: 0 D: 0 C: 0 E: 2 Q: 1 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 1 S: 0 T: 1 W: 0 Y: 2 V: 2

Length

10

Formula

C52H74N10O18

Mass

1127.22

PI

3.13

Net Charge

-2

Boman Index

3.47

Hydrophobicity

-0.700

Evidence 1 Activity

Source & Reference

Database Source dbAMP

Other

Source Activity Label	Source Definition
Antifungal	dbAMP classified under the Anti-fungal function class.