TPDB

3D PDB MODEL

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TPDB ID TPDB49903

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP

Sequence_Type

modified_plain

Has_Modification Yes

Description A 15-aa modified antifungal peptide sequence curated from dbAMP, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

AVTXGQVDANLAPXV

FASTA

>TPDB49903|Antifungal|length=15
AVTXGQVDANLAPXV

Formula C54H91N15O19

Absent Amino Acids RCEHIKMFSWY

Common Amino Acids AV

Mass 1254.41

PI 3.10

Basic Residues 0

Acidic Residues 1

Hydrophobic Residues 7

Net Charge -1

Boman Index 1.97

Hydrophobicity 0.573

Aliphatic Index 104.00

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 3

number

3

A

0

R

1

N

1

D

0

C

0

E

1

Q

1

G

0

H

0

I

1

L

0

K

0

M

0

F

1

P

0

S

1

T

0

W

0

Y

3

V

Amino Acid Distribution

A: 3 R: 0 N: 1 D: 1 C: 0 E: 0 Q: 1 G: 1 H: 0 I: 0 L: 1 K: 0 M: 0 F: 0 P: 1 S: 0 T: 1 W: 0 Y: 0 V: 3

Length

15

Formula

C54H91N15O19

Mass

1254.41

PI

3.10

Net Charge

-1

Boman Index

1.97

Hydrophobicity

0.573

Evidence 1 Activity

Source & Reference

Database Source dbAMP

Other

Source Activity Label	Source Definition
Antifungal	dbAMP classified under the Anti-fungal function class.