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Peptide record

TPDB49891

Antifungal standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB49891
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 10-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
SHRFKGMCVS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C48H78N16O13S2
ANDEQILPTWY
S
1151.37
10.11
3
0
3
+2
2.03
-0.220
29.00
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
0
A
1
R
0
N
0
D
1
C
0
E
0
Q
1
G
1
H
0
I
0
L
1
K
1
M
1
F
0
P
2
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 1 E: 0 Q: 0 G: 1 H: 1 I: 0 L: 0 K: 1 M: 1 F: 1 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
10 reviewed residue count
C48H78N16O13S2 sequence-only estimate (linear, free termini)
1151.37 sequence-only estimate (linear, free termini)
10.11 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
2.03 sequence-only estimate (linear, free termini)
-0.220 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.