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Peptide record

TPDB49890

Antifungal standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB49890
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 10-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
RHCLSQSHRF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C53H83N21O14S1
ANDEGIKMPTWYV
RHS
1270.43
10.90
4
0
2
+2
4.23
-1.140
39.00
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
0
0.00
4
Residue Composition
number
0
A
2
R
0
N
0
D
1
C
0
E
1
Q
0
G
2
H
0
I
1
L
0
K
0
M
1
F
0
P
2
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 0 C: 1 E: 0 Q: 1 G: 0 H: 2 I: 0 L: 1 K: 0 M: 0 F: 1 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
10 reviewed residue count
C53H83N21O14S1 sequence-only estimate (linear, free termini)
1270.43 sequence-only estimate (linear, free termini)
10.90 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
4.23 sequence-only estimate (linear, free termini)
-1.140 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.