Back to search

Peptide record

TPDB49888

Antifungal standard
14 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB49888
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 14-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
TNGKKYKKKEYCCK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C75H125N21O21S2
ARDQHILMFPSWV
K
1721.07
10.00
6
1
2
+5
3.29
-2.079
0.00
Mammalian: 7.2 hour Yeast: >20 hour E.coli: >10 hour
3105
1.80
6
Residue Composition
number
0
A
0
R
1
N
0
D
2
C
1
E
0
Q
1
G
0
H
0
I
0
L
6
K
0
M
0
F
0
P
0
S
1
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 0 C: 2 E: 1 Q: 0 G: 1 H: 0 I: 0 L: 0 K: 6 M: 0 F: 0 P: 0 S: 0 T: 1 W: 0 Y: 2 V: 0
Chemical Descriptors
14 reviewed residue count
C75H125N21O21S2 sequence-only estimate (linear, free termini)
1721.07 sequence-only estimate (linear, free termini)
10.00 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
3.29 sequence-only estimate (linear, free termini)
-2.079 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.