Back to search

Peptide record

TPDB49886

Antifungal standard
9 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB49886
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 9-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
GLLKWIKKL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C55H95N13O10
ARNDCEQHMFPSTYV
LK
1098.44
10.84
3
0
5
+3
-0.70
0.322
173.33
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
5500
5.01
0
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
0
Q
1
G
0
H
1
I
3
L
3
K
0
M
0
F
0
P
0
S
0
T
1
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 1 L: 3 K: 3 M: 0 F: 0 P: 0 S: 0 T: 0 W: 1 Y: 0 V: 0
Chemical Descriptors
9 reviewed residue count
C55H95N13O10 sequence-only estimate (linear, free termini)
1098.44 sequence-only estimate (linear, free termini)
10.84 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
-0.70 sequence-only estimate (linear, free termini)
0.322 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.