Back to search

Peptide record

TPDB49884

Antifungal standard
8 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB49884
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 8-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
RKWIWRWF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C66H88N18O9
ANDCEQGHLMPSTYV
W
1277.54
12.41
3
0
5
+3
2.56
-1.038
48.75
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
16500
12.92
0
Residue Composition
number
0
A
2
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
0
L
1
K
0
M
1
F
0
P
0
S
0
T
3
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 0 K: 1 M: 0 F: 1 P: 0 S: 0 T: 0 W: 3 Y: 0 V: 0
Chemical Descriptors
8 reviewed residue count
C66H88N18O9 sequence-only estimate (linear, free termini)
1277.54 sequence-only estimate (linear, free termini)
12.41 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
2.56 sequence-only estimate (linear, free termini)
-1.038 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.