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Peptide record

TPDB49882

Antifungal standard
14 amino acids
Basic Information
3D PDB MODEL
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TPDB49882
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 14-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
HCEYDEHHRRVDCQ
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C73H107N27O25S2
ANGILKMFPSTW
H
1826.94
5.75
5
4
2
-2
5.28
-2.014
20.71
Mammalian: 3.5 hour Yeast: 10 min E.coli: >10 hour
1615
0.88
4
Residue Composition
number
0
A
2
R
0
N
2
D
2
C
2
E
1
Q
0
G
3
H
0
I
0
L
0
K
0
M
0
F
0
P
0
S
0
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 2 C: 2 E: 2 Q: 1 G: 0 H: 3 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 1 V: 1
Chemical Descriptors
14 reviewed residue count
C73H107N27O25S2 sequence-only estimate (linear, free termini)
1826.94 sequence-only estimate (linear, free termini)
5.75 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
5.28 sequence-only estimate (linear, free termini)
-2.014 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.