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Peptide record

TPDB49881

Antifungal standard
17 amino acids
Basic Information
3D PDB MODEL
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TPDB49881
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 17-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
NTCTYLKGGRNVIVNCG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C75H126N24O24S2
ADEQHMFPSW
NG
1812.09
9.06
2
0
5
+2
1.32
-0.065
80.00
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
1615
0.89
8
Residue Composition
number
0
A
1
R
3
N
0
D
2
C
0
E
0
Q
3
G
0
H
1
I
1
L
1
K
0
M
0
F
0
P
0
S
2
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 0 R: 1 N: 3 D: 0 C: 2 E: 0 Q: 0 G: 3 H: 0 I: 1 L: 1 K: 1 M: 0 F: 0 P: 0 S: 0 T: 2 W: 0 Y: 1 V: 2
Chemical Descriptors
17 reviewed residue count
C75H126N24O24S2 sequence-only estimate (linear, free termini)
1812.09 sequence-only estimate (linear, free termini)
9.06 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
1.32 sequence-only estimate (linear, free termini)
-0.065 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.