Back to search

Peptide record

TPDB49880

Antifungal standard
18 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB49880
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 18-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
NAGSAANKRAKSDRHHAE
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C76H126N32O27
CQILMFPTWYV
A
1920.03
10.57
6
2
5
+2
4.22
-1.678
27.78
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
0
0.00
4
Residue Composition
number
5
A
2
R
2
N
1
D
0
C
1
E
0
Q
1
G
2
H
0
I
0
L
2
K
0
M
0
F
0
P
2
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 5 R: 2 N: 2 D: 1 C: 0 E: 1 Q: 0 G: 1 H: 2 I: 0 L: 0 K: 2 M: 0 F: 0 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
18 reviewed residue count
C76H126N32O27 sequence-only estimate (linear, free termini)
1920.03 sequence-only estimate (linear, free termini)
10.57 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
4.22 sequence-only estimate (linear, free termini)
-1.678 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.