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Peptide record

TPDB49879

Antifungal standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB49879
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 18-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
NCGSAANKRAKSDRHHCE
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C76H126N32O27S2
QILMFPTWYV
A
1984.15
9.11
6
2
3
+2
4.27
-1.600
16.67
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
125
0.06
6
Residue Composition
number
3
A
2
R
2
N
1
D
2
C
1
E
0
Q
1
G
2
H
0
I
0
L
2
K
0
M
0
F
0
P
2
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 3 R: 2 N: 2 D: 1 C: 2 E: 1 Q: 0 G: 1 H: 2 I: 0 L: 0 K: 2 M: 0 F: 0 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
18 reviewed residue count
C76H126N32O27S2 sequence-only estimate (linear, free termini)
1984.15 sequence-only estimate (linear, free termini)
9.11 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
4.27 sequence-only estimate (linear, free termini)
-1.600 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.