Back to search

Peptide record

TPDB49867

Antifungal standard
15 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB49867
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 15-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
GGSGGGSSGGSIGGR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C42H72N18O20
ANDCEQHLKMFPTWYV
G
1149.14
11.05
1
0
1
+1
1.01
-0.453
26.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
4
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
0
Q
9
G
0
H
1
I
0
L
0
K
0
M
0
F
0
P
4
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 9 H: 0 I: 1 L: 0 K: 0 M: 0 F: 0 P: 0 S: 4 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
15 reviewed residue count
C42H72N18O20 sequence-only estimate (linear, free termini)
1149.14 sequence-only estimate (linear, free termini)
11.05 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.01 sequence-only estimate (linear, free termini)
-0.453 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.