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Peptide record

TPDB49866

Antifungal standard
11 amino acids
Basic Information
3D PDB MODEL
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TPDB49866
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 11-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
PLSSPATLNSR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C48H83N15O17
DCEQGHIKMFWYV
S
1142.28
11.05
1
0
3
+1
2.06
-0.445
80.00
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
0
0.00
5
Residue Composition
number
1
A
1
R
1
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
2
L
0
K
0
M
0
F
2
P
3
S
1
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 1 N: 1 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 2 K: 0 M: 0 F: 0 P: 2 S: 3 T: 1 W: 0 Y: 0 V: 0
Chemical Descriptors
11 reviewed residue count
C48H83N15O17 sequence-only estimate (linear, free termini)
1142.28 sequence-only estimate (linear, free termini)
11.05 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
2.06 sequence-only estimate (linear, free termini)
-0.445 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.