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Peptide record

TPDB49862

Antifungal standard
38 amino acids
Basic Information
3D PDB MODEL
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TPDB49862
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 38-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
SRGGRCERKCRRHSDWQTRQRCLQQCEQRERQEEGGRD
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C182H304N78O62S4
ANIMFPYV
R
4705.14
9.32
12
7
2
+4
6.25
-2.332
10.26
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
5750
1.22
13
Residue Composition
number
0
A
10
R
0
N
2
D
4
C
5
E
6
Q
4
G
1
H
0
I
1
L
1
K
0
M
0
F
0
P
2
S
1
T
1
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 10 N: 0 D: 2 C: 4 E: 5 Q: 6 G: 4 H: 1 I: 0 L: 1 K: 1 M: 0 F: 0 P: 0 S: 2 T: 1 W: 1 Y: 0 V: 0
Chemical Descriptors
38 reviewed residue count
C182H304N78O62S4 sequence-only estimate (linear, free termini)
4705.14 sequence-only estimate (linear, free termini)
9.32 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
6.25 sequence-only estimate (linear, free termini)
-2.332 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.