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Peptide record

TPDB49860

Antifungal standard
26 amino acids
Basic Information
3D PDB MODEL
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TPDB49860
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 26-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
NATFYFKIDNVKKARVQVVAGKKYFI
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C145H227N37O35
CEHLMPSW
K
3048.62
10.54
6
1
14
+5
1.22
-0.081
86.15
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
2980
0.98
6
Residue Composition
number
3
A
1
R
2
N
1
D
0
C
0
E
1
Q
1
G
0
H
2
I
0
L
5
K
0
M
3
F
0
P
0
S
1
T
0
W
2
Y
4
V
Amino Acid Distribution
A: 3 R: 1 N: 2 D: 1 C: 0 E: 0 Q: 1 G: 1 H: 0 I: 2 L: 0 K: 5 M: 0 F: 3 P: 0 S: 0 T: 1 W: 0 Y: 2 V: 4
Chemical Descriptors
26 reviewed residue count
C145H227N37O35 sequence-only estimate (linear, free termini)
3048.62 sequence-only estimate (linear, free termini)
10.54 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
1.22 sequence-only estimate (linear, free termini)
-0.081 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.