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Peptide record

TPDB49853

Antifungal standard
5 amino acids
Basic Information
3D PDB MODEL
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TPDB49853
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 5-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
WRNWE
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C37H47N11O9
ADCQGHILKMFPSTYV
W
789.85
6.97
1
1
2
-0
4.74
-2.660
0.00
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
11000
13.93
1
Residue Composition
number
0
A
1
R
1
N
0
D
0
C
1
E
0
Q
0
G
0
H
0
I
0
L
0
K
0
M
0
F
0
P
0
S
0
T
2
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 1 D: 0 C: 0 E: 1 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 2 Y: 0 V: 0
Chemical Descriptors
5 reviewed residue count
C37H47N11O9 sequence-only estimate (linear, free termini)
789.85 sequence-only estimate (linear, free termini)
6.97 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
4.74 sequence-only estimate (linear, free termini)
-2.660 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.