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Peptide record

TPDB49847

Antifungal standard
32 amino acids
Basic Information
3D PDB MODEL
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TPDB49847
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 32-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
NLPLLDILKPGGGTSGGLLGGLLGKVTSVIPG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C137H237N35O40
ARCEQHMFWY
G
3014.60
9.88
2
1
12
+1
-0.85
0.675
140.00
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
0
0.00
5
Residue Composition
number
0
A
0
R
1
N
1
D
0
C
0
E
0
Q
9
G
0
H
2
I
8
L
2
K
0
M
0
F
3
P
2
S
2
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 1 C: 0 E: 0 Q: 0 G: 9 H: 0 I: 2 L: 8 K: 2 M: 0 F: 0 P: 3 S: 2 T: 2 W: 0 Y: 0 V: 2
Chemical Descriptors
32 reviewed residue count
C137H237N35O40 sequence-only estimate (linear, free termini)
3014.60 sequence-only estimate (linear, free termini)
9.88 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-0.85 sequence-only estimate (linear, free termini)
0.675 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.