TPDB

3D PDB MODEL

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TPDB ID TPDB49844

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP

Sequence_Type

standard

Has_Modification No

Description A 41-aa standard natural antifungal peptide sequence curated from dbAMP, with an available 3D structural model.

Sequence

KSCCRNTWARNCYNVCRLPGTISREICAKKCRCKIISGTTC

FASTA

>TPDB49844|Antifungal|length=41
KSCCRNTWARNCYNVCRLPGTISREICAKKCRCKIISGTTC

Formula C190H324N64O55S8

Absent Amino Acids DQHMF

Common Amino Acids C

Mass 4641.54

PI 9.33

Basic Residues 9

Acidic Residues 1

Hydrophobic Residues 10

Net Charge +8

Boman Index 5.93

Hydrophobicity -0.300

Aliphatic Index 59.51

Half Life

Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 7490

Absorbance 280nm 161.37

Polar Residues 19

number

2

A

5

R

3

N

0

D

8

C

1

E

0

Q

2

G

0

H

4

I

1

L

4

K

0

M

0

F

1

P

3

S

4

T

1

W

1

Y

1

V

Amino Acid Distribution

A: 2 R: 5 N: 3 D: 0 C: 8 E: 1 Q: 0 G: 2 H: 0 I: 4 L: 1 K: 4 M: 0 F: 0 P: 1 S: 3 T: 4 W: 1 Y: 1 V: 1

Length

41

Formula

C190H324N64O55S8

Mass

4641.54

PI

9.33

Net Charge

+8

Boman Index

5.93

Hydrophobicity

-0.300

Evidence 1 Activity

Source & Reference

Database Source dbAMP

Other

Source Activity Label	Source Definition
Antifungal	dbAMP classified under the Anti-fungal function class.