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Peptide record

TPDB49844

Antifungal standard
41 amino acids
Basic Information
3D PDB MODEL
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TPDB49844
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 41-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
KSCCRNTWARNCYNVCRLPGTISREICAKKCRCKIISGTTC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C190H324N64O55S8
DQHMF
C
4641.54
9.33
9
1
10
+8
2.38
-0.300
59.51
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
7490
1.61
19
Residue Composition
number
2
A
5
R
3
N
0
D
8
C
1
E
0
Q
2
G
0
H
4
I
1
L
4
K
0
M
0
F
1
P
3
S
4
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 2 R: 5 N: 3 D: 0 C: 8 E: 1 Q: 0 G: 2 H: 0 I: 4 L: 1 K: 4 M: 0 F: 0 P: 1 S: 3 T: 4 W: 1 Y: 1 V: 1
Chemical Descriptors
41 reviewed residue count
C190H324N64O55S8 sequence-only estimate (linear, free termini)
4641.54 sequence-only estimate (linear, free termini)
9.33 sequence-only estimate (linear, free termini)
+8 sequence-only estimate (linear, free termini)
2.38 sequence-only estimate (linear, free termini)
-0.300 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.