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Peptide record

TPDB49842

Antifungal standard
38 amino acids
Basic Information
3D PDB MODEL
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TPDB49842
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 38-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
CCRNTWARNCYNVCRLPGTISREICAKKCDKIISGTTC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C176H295N57O53S7
QHMF
C
4282.05
8.68
7
2
10
+5
2.20
-0.239
64.21
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
7365
1.72
17
Residue Composition
number
2
A
4
R
3
N
1
D
7
C
1
E
0
Q
2
G
0
H
4
I
1
L
3
K
0
M
0
F
1
P
2
S
4
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 2 R: 4 N: 3 D: 1 C: 7 E: 1 Q: 0 G: 2 H: 0 I: 4 L: 1 K: 3 M: 0 F: 0 P: 1 S: 2 T: 4 W: 1 Y: 1 V: 1
Chemical Descriptors
38 reviewed residue count
C176H295N57O53S7 sequence-only estimate (linear, free termini)
4282.05 sequence-only estimate (linear, free termini)
8.68 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.20 sequence-only estimate (linear, free termini)
-0.239 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.