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Peptide record

TPDB49838

Antifungal standard
32 amino acids
Basic Information
3D PDB MODEL
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TPDB49838
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 32-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
IGRFGYGYGPYQPVPEQPLYPQPYQPQYQQYT
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C182H248N42O50
ANDCHKMSW
QPY
3824.22
6.68
1
1
11
-0
1.36
-1.244
33.44
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
10430
2.73
15
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
1
E
7
Q
4
G
0
H
1
I
1
L
0
K
0
M
1
F
7
P
0
S
1
T
0
W
7
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 1 Q: 7 G: 4 H: 0 I: 1 L: 1 K: 0 M: 0 F: 1 P: 7 S: 0 T: 1 W: 0 Y: 7 V: 1
Chemical Descriptors
32 reviewed residue count
C182H248N42O50 sequence-only estimate (linear, free termini)
3824.22 sequence-only estimate (linear, free termini)
6.68 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
1.36 sequence-only estimate (linear, free termini)
-1.244 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.