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Peptide record

TPDB49837

Antifungal standard
71 amino acids
Basic Information
3D PDB MODEL
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TPDB49837
Antifungal
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 71-aa standard-residue antifungal peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
VPCIDGVCTSNELQCASGYVKGCHAGLCTCEHATTQSCTVVNNCLHLGTCSLHGRDGFWHCVDSVCKCFFF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C322H490N92O99S12
M
C
7618.71
6.16
8
5
22
-2
0.75
0.301
65.77
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
7740
1.02
29
Residue Composition
number
3
A
1
R
3
N
3
D
12
C
2
E
2
Q
7
G
5
H
1
I
5
L
2
K
0
M
4
F
1
P
5
S
6
T
1
W
1
Y
7
V
Amino Acid Distribution
A: 3 R: 1 N: 3 D: 3 C: 12 E: 2 Q: 2 G: 7 H: 5 I: 1 L: 5 K: 2 M: 0 F: 4 P: 1 S: 5 T: 6 W: 1 Y: 1 V: 7
Chemical Descriptors
71 reviewed residue count
C322H490N92O99S12 sequence-only estimate (linear, free termini)
7618.71 sequence-only estimate (linear, free termini)
6.16 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
0.75 sequence-only estimate (linear, free termini)
0.301 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.