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Peptide record

TPDB49834

Antifungal standard
112 amino acids
Basic Information
3D PDB MODEL
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TPDB49834
Antifungal
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 112-aa standard-residue antifungal peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
SDRLNSGHQLDTGGSLAEGGYLFIIQNDCNLVLYDNNRAVWASGTNGKASGCVLKMQNDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNVGN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C529H820N162O172S3
P
N
12297.49
7.15
10
8
43
+0
1.94
-0.471
84.46
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
25565
2.08
45
Residue Composition
number
8
A
6
R
18
N
7
D
2
C
1
E
5
Q
12
G
2
H
7
I
10
L
2
K
1
M
1
F
0
P
9
S
5
T
3
W
6
Y
7
V
Amino Acid Distribution
A: 8 R: 6 N: 18 D: 7 C: 2 E: 1 Q: 5 G: 12 H: 2 I: 7 L: 10 K: 2 M: 1 F: 1 P: 0 S: 9 T: 5 W: 3 Y: 6 V: 7
Chemical Descriptors
112 reviewed residue count
C529H820N162O172S3 sequence-only estimate (linear, free termini)
12297.49 sequence-only estimate (linear, free termini)
7.15 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
1.94 sequence-only estimate (linear, free termini)
-0.471 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.