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Peptide record

TPDB49830

Antifungal standard
282 amino acids
Basic Information
3D PDB MODEL
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TPDB49830
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 282-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
GSAAKMAKNVDKPLFTATFNVQASSADYATFIAGIRNKLRNPAHFSHNRPVLPPVEPNVPPSRWFHVVLKASPTSAGLTLAIRADNIYLEGFKSSDGTWWELTPGLIPGATYVGFGGTYRDLLGDTDKLTNVALGRQQLADAVTALHGRTKADKPSGPKQQQAREAVTTLLLMVNEATRFQTVSGFVAGLLHPKAVAAASGKIGNEMKAQVNGWQDLSAALLKTDVKPPPGKSPAKFAPIEKMGVRTAVQAANTLGILLFVEVPGGLTVAKALELFHASGGK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C1344H2141N373O385S4
C
A
29813.29
10.29
37
20
121
+12
1.00
-0.083
87.27
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
27960
0.94
62
Residue Composition
number
38
A
11
R
12
N
11
D
0
C
9
E
10
Q
26
G
6
H
8
I
29
L
20
K
4
M
12
F
20
P
15
S
21
T
4
W
4
Y
22
V
Amino Acid Distribution
A: 38 R: 11 N: 12 D: 11 C: 0 E: 9 Q: 10 G: 26 H: 6 I: 8 L: 29 K: 20 M: 4 F: 12 P: 20 S: 15 T: 21 W: 4 Y: 4 V: 22
Chemical Descriptors
282 reviewed residue count
C1344H2141N373O385S4 sequence-only estimate (linear, free termini)
29813.29 sequence-only estimate (linear, free termini)
10.29 sequence-only estimate (linear, free termini)
+12 sequence-only estimate (linear, free termini)
1.00 sequence-only estimate (linear, free termini)
-0.083 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.