TPDB

3D PDB MODEL

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TPDB ID TPDB49829

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

dbAMP Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 33-aa modified antifungal peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

EQCGRQAGGKLCPNNLCCSQWGWCGSTDEYCSX

FASTA

>TPDB49829|Antifungal|length=33
EQCGRQAGGKLCPNNLCCSQWGWCGSTDEYCSX

Formula C141H211N43O49S6

Absent Amino Acids HIMFV

Common Amino Acids C

Mass 3484.84

PI 4.44

Basic Residues 2

Acidic Residues 3

Hydrophobic Residues 6

Net Charge -1

Boman Index 3.31

Hydrophobicity -0.661

Aliphatic Index 26.67

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 12865

Absorbance 280nm 369.17

Polar Residues 16

number

1

A

1

R

2

N

1

D

6

C

2

E

3

Q

5

G

0

H

0

I

2

L

1

K

0

M

0

F

1

P

3

S

1

T

2

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 1 N: 2 D: 1 C: 6 E: 2 Q: 3 G: 5 H: 0 I: 0 L: 2 K: 1 M: 0 F: 0 P: 1 S: 3 T: 1 W: 2 Y: 1 V: 0

Length

33

Formula

C141H211N43O49S6

Mass

3484.84

PI

4.44

Net Charge

-1

Boman Index

3.31

Hydrophobicity

-0.661

Evidence 1 Activity

Source & Reference

Database Source dbAMP

Other

Source Activity Label	Source Definition
Antifungal	dbAMP classified under the Anti-fungal function class.