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Peptide record

TPDB49828

Antifungal standard
51 amino acids
Basic Information
3D PDB MODEL
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TPDB49828
Antifungal
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 51-aa standard-residue antifungal peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
EKLCERPSGTWSGVCGNNNACKNQCINLEKARHGSCNYVFPAHKCICYFPC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C242H371N73O71S8
DM
C
5695.53
8.10
8
3
14
+3
1.66
-0.451
47.84
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
8980
1.58
21
Residue Composition
number
3
A
2
R
6
N
0
D
8
C
3
E
1
Q
4
G
2
H
2
I
2
L
4
K
0
M
2
F
3
P
3
S
1
T
1
W
2
Y
2
V
Amino Acid Distribution
A: 3 R: 2 N: 6 D: 0 C: 8 E: 3 Q: 1 G: 4 H: 2 I: 2 L: 2 K: 4 M: 0 F: 2 P: 3 S: 3 T: 1 W: 1 Y: 2 V: 2
Chemical Descriptors
51 reviewed residue count
C242H371N73O71S8 sequence-only estimate (linear, free termini)
5695.53 sequence-only estimate (linear, free termini)
8.10 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.66 sequence-only estimate (linear, free termini)
-0.451 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.