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Peptide record

TPDB49825

Antifungal standard
206 amino acids
Basic Information
3D PDB MODEL
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TPDB49825
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 206-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
AVFTVVNQCPFTVWAASVPVGGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C958H1455N275O293S17
G
22057.78
7.69
21
17
72
+2
1.58
-0.245
54.03
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
29420
1.33
68
Residue Composition
number
21
A
13
R
12
N
13
D
16
C
4
E
6
Q
22
G
1
H
4
I
8
L
7
K
1
M
12
F
14
P
12
S
14
T
3
W
8
Y
15
V
Amino Acid Distribution
A: 21 R: 13 N: 12 D: 13 C: 16 E: 4 Q: 6 G: 22 H: 1 I: 4 L: 8 K: 7 M: 1 F: 12 P: 14 S: 12 T: 14 W: 3 Y: 8 V: 15
Chemical Descriptors
206 reviewed residue count
C958H1455N275O293S17 sequence-only estimate (linear, free termini)
22057.78 sequence-only estimate (linear, free termini)
7.69 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
1.58 sequence-only estimate (linear, free termini)
-0.245 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.