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Peptide record

TPDB49824

Antifungal standard
207 amino acids
Basic Information
3D PDB MODEL
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TPDB49824
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 207-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
ATIEVRNNCPYTVWAASTPIGGGRRLNRGQTWVINAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCPNG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C965H1470N280O290S18
G
22211.07
8.21
21
12
61
+6
1.51
-0.414
48.12
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
37440
1.69
74
Residue Composition
number
14
A
11
R
15
N
8
D
16
C
4
E
8
Q
27
G
2
H
8
I
8
L
8
K
2
M
10
F
18
P
8
S
21
T
5
W
6
Y
8
V
Amino Acid Distribution
A: 14 R: 11 N: 15 D: 8 C: 16 E: 4 Q: 8 G: 27 H: 2 I: 8 L: 8 K: 8 M: 2 F: 10 P: 18 S: 8 T: 21 W: 5 Y: 6 V: 8
Chemical Descriptors
207 reviewed residue count
C965H1470N280O290S18 sequence-only estimate (linear, free termini)
22211.07 sequence-only estimate (linear, free termini)
8.21 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
1.51 sequence-only estimate (linear, free termini)
-0.414 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.