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Peptide record

TPDB49817

Antifungal standard
113 amino acids
Basic Information
3D PDB MODEL
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TPDB49817
Antifungal
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 113-aa standard-residue antifungal peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
APQSITELCSEYHNTQIYTINDKILSYTESMAGKREMVIITFKSGATFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMEKLYAGAVVNDL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C561H906N148O176S6
I
12732.61
7.16
15
13
45
+0
1.58
-0.294
88.05
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
13075
1.03
38
Residue Composition
number
8
A
3
R
6
N
5
D
2
C
8
E
5
Q
4
G
2
H
12
I
7
L
10
K
4
M
2
F
3
P
9
S
11
T
1
W
5
Y
6
V
Amino Acid Distribution
A: 8 R: 3 N: 6 D: 5 C: 2 E: 8 Q: 5 G: 4 H: 2 I: 12 L: 7 K: 10 M: 4 F: 2 P: 3 S: 9 T: 11 W: 1 Y: 5 V: 6
Chemical Descriptors
113 reviewed residue count
C561H906N148O176S6 sequence-only estimate (linear, free termini)
12732.61 sequence-only estimate (linear, free termini)
7.16 sequence-only estimate (linear, free termini)
+0 sequence-only estimate (linear, free termini)
1.58 sequence-only estimate (linear, free termini)
-0.294 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.