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Peptide record

TPDB49814

Antifungal standard
121 amino acids
Basic Information
3D PDB MODEL
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TPDB49814
Antifungal
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 121-aa standard-residue antifungal peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
AGFSMDKANSEACRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIADKKYYPSSQDSS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C565H925N171O194S7
W
A
13442.01
5.03
18
20
44
-5
2.48
-0.664
73.47
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
3105
0.23
35
Residue Composition
number
15
A
7
R
5
N
7
D
3
C
13
E
10
Q
5
G
3
H
2
I
11
L
8
K
4
M
2
F
1
P
9
S
6
T
0
W
2
Y
8
V
Amino Acid Distribution
A: 15 R: 7 N: 5 D: 7 C: 3 E: 13 Q: 10 G: 5 H: 3 I: 2 L: 11 K: 8 M: 4 F: 2 P: 1 S: 9 T: 6 W: 0 Y: 2 V: 8
Chemical Descriptors
121 reviewed residue count
C565H925N171O194S7 sequence-only estimate (linear, free termini)
13442.01 sequence-only estimate (linear, free termini)
5.03 sequence-only estimate (linear, free termini)
-5 sequence-only estimate (linear, free termini)
2.48 sequence-only estimate (linear, free termini)
-0.664 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.