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Peptide record

TPDB49805

Antifungal standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB49805
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 19-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
LPSDATLVLDQTGKELDAR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C87H148N24O32
NCHIMFWY
L
2042.27
3.97
2
4
7
-2
2.07
-0.374
107.89
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
0
0.00
4
Residue Composition
number
2
A
1
R
0
N
3
D
0
C
1
E
1
Q
1
G
0
H
0
I
4
L
1
K
0
M
0
F
1
P
1
S
2
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 2 R: 1 N: 0 D: 3 C: 0 E: 1 Q: 1 G: 1 H: 0 I: 0 L: 4 K: 1 M: 0 F: 0 P: 1 S: 1 T: 2 W: 0 Y: 0 V: 1
Chemical Descriptors
19 reviewed residue count
C87H148N24O32 sequence-only estimate (linear, free termini)
2042.27 sequence-only estimate (linear, free termini)
3.97 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
2.07 sequence-only estimate (linear, free termini)
-0.374 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb