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Peptide record

TPDB49783

Antifungal standard
48 amino acids
Basic Information
3D PDB MODEL
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TPDB49783
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 48-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
NCDTDIAYMVCPSSGERIIRKVCTNCCAAQKGCCKLFRSNGSIKCTGT
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C209H351N65O68S9
HW
C
5151.02
8.31
7
3
13
+4
1.73
-0.079
58.96
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
1990
0.39
21
Residue Composition
number
3
A
3
R
3
N
2
D
8
C
1
E
1
Q
4
G
0
H
4
I
1
L
4
K
1
M
1
F
1
P
4
S
4
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 3 R: 3 N: 3 D: 2 C: 8 E: 1 Q: 1 G: 4 H: 0 I: 4 L: 1 K: 4 M: 1 F: 1 P: 1 S: 4 T: 4 W: 0 Y: 1 V: 2
Chemical Descriptors
48 reviewed residue count
C209H351N65O68S9 sequence-only estimate (linear, free termini)
5151.02 sequence-only estimate (linear, free termini)
8.31 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.73 sequence-only estimate (linear, free termini)
-0.079 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb