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Peptide record

TPDB49778

Antifungal standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB49778
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 18-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
LSPGDVLVIPAGYPVAIK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C86H141N19O23
RNCEQHMFTW
PV
1809.18
6.68
1
1
10
-0
-1.08
0.983
146.11
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
1490
0.82
2
Residue Composition
number
2
A
0
R
0
N
1
D
0
C
0
E
0
Q
2
G
0
H
2
I
2
L
1
K
0
M
0
F
3
P
1
S
0
T
0
W
1
Y
3
V
Amino Acid Distribution
A: 2 R: 0 N: 0 D: 1 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 2 L: 2 K: 1 M: 0 F: 0 P: 3 S: 1 T: 0 W: 0 Y: 1 V: 3
Chemical Descriptors
18 reviewed residue count
C86H141N19O23 sequence-only estimate (linear, free termini)
1809.18 sequence-only estimate (linear, free termini)
6.68 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
-1.08 sequence-only estimate (linear, free termini)
0.983 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb