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Peptide record

TPDB49772

Antifungal standard
46 amino acids
Basic Information
3D PDB MODEL
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TPDB49772
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 46-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
KSCCPNTTGRNIYNTCRLGGGSRERCASLSGCKIISGSTCPSDYPK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C196H326N64O67S6
QHMFWV
S
4843.49
8.88
7
2
8
+5
2.31
-0.598
44.57
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
3355
0.69
22
Residue Composition
number
1
A
4
R
3
N
1
D
6
C
1
E
0
Q
6
G
0
H
3
I
2
L
3
K
0
M
0
F
3
P
7
S
4
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 1 R: 4 N: 3 D: 1 C: 6 E: 1 Q: 0 G: 6 H: 0 I: 3 L: 2 K: 3 M: 0 F: 0 P: 3 S: 7 T: 4 W: 0 Y: 2 V: 0
Chemical Descriptors
46 reviewed residue count
C196H326N64O67S6 sequence-only estimate (linear, free termini)
4843.49 sequence-only estimate (linear, free termini)
8.88 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.31 sequence-only estimate (linear, free termini)
-0.598 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb