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Peptide record

TPDB49770

Antifungal standard
24 amino acids
Basic Information
3D PDB MODEL
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TPDB49770
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 24-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
KQVAEMNKPAVGSKTSDANHDLKS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C106H179N33O38S1
RCIFWY
K
2555.85
9.67
5
3
7
+1
2.54
-1.058
52.92
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
7
Residue Composition
number
3
A
0
R
2
N
2
D
0
C
1
E
1
Q
1
G
1
H
0
I
1
L
4
K
1
M
0
F
1
P
3
S
1
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 3 R: 0 N: 2 D: 2 C: 0 E: 1 Q: 1 G: 1 H: 1 I: 0 L: 1 K: 4 M: 1 F: 0 P: 1 S: 3 T: 1 W: 0 Y: 0 V: 2
Chemical Descriptors
24 reviewed residue count
C106H179N33O38S1 sequence-only estimate (linear, free termini)
2555.85 sequence-only estimate (linear, free termini)
9.67 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
2.54 sequence-only estimate (linear, free termini)
-1.058 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb