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Peptide record

TPDB49758

Antifungal standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB49758
Antifungal
Anti-infective peptides
CAFPdb Peptipedia
standard
No
A 15-aa standard-residue antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.
Sequence
GHLIVNYEFVNCGDN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C74H108N20O24S1
ARQKMPSTW
N
1693.85
4.06
1
2
6
-2
1.08
-0.053
90.67
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
1490
0.88
5
Residue Composition
number
0
A
0
R
3
N
1
D
1
C
1
E
0
Q
2
G
1
H
1
I
1
L
0
K
0
M
1
F
0
P
0
S
0
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 0 R: 0 N: 3 D: 1 C: 1 E: 1 Q: 0 G: 2 H: 1 I: 1 L: 1 K: 0 M: 0 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 1 V: 2
Chemical Descriptors
15 reviewed residue count
C74H108N20O24S1 sequence-only estimate (linear, free termini)
1693.85 sequence-only estimate (linear, free termini)
4.06 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
1.08 sequence-only estimate (linear, free termini)
-0.053 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb