TPDB

3D PDB MODEL

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TPDB ID TPDB49756

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

CAFPdb Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 30-aa modified antifungal peptide sequence curated from CAFPdb and Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

EQCGSQVGGKTCPNNLCCXKYGWCGDTDDH

FASTA

>TPDB49756|Antifungal|length=30
EQCGSQVGGKTCPNNLCCXKYGWCGDTDDH

Formula C125H188N38O46S5

Absent Amino Acids ARIMF

Common Amino Acids CG

Mass 3119.39

PI 4.44

Basic Residues 3

Acidic Residues 4

Hydrophobic Residues 4

Net Charge -2

Boman Index 7.08

Hydrophobicity -0.883

Aliphatic Index 22.67

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 7240

Absorbance 280nm 232.10

Polar Residues 13

number

0

A

0

R

2

N

3

D

5

C

1

E

2

Q

5

G

1

H

0

I

1

L

2

K

0

M

0

F

1

P

1

S

2

T

1

W

1

Y

1

V

Amino Acid Distribution

A: 0 R: 0 N: 2 D: 3 C: 5 E: 1 Q: 2 G: 5 H: 1 I: 0 L: 1 K: 2 M: 0 F: 0 P: 1 S: 1 T: 2 W: 1 Y: 1 V: 1

Length

30

Formula

C125H188N38O46S5

Mass

3119.39

PI

4.44

Net Charge

-2

Boman Index

7.08

Hydrophobicity

-0.883

Evidence 1 Activity

Source & Reference

Database Source CAFPdb