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Peptide record

TPDB49752

Antifungal standard
64 amino acids
Basic Information
3D PDB MODEL
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TPDB49752
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 64-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
AKCIKNGKGCREDQGPPFCCSGFCYRQVGWARGYCKNRMAKVSSSLLKFAIVLILVLSMSAIIS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C309H503N87O82S8
HT
S
7005.41
9.78
10
2
27
+8
0.83
0.272
86.88
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
8855
1.26
19
Residue Composition
number
5
A
4
R
2
N
1
D
6
C
1
E
2
Q
6
G
0
H
5
I
5
L
6
K
2
M
3
F
2
P
7
S
0
T
1
W
2
Y
4
V
Amino Acid Distribution
A: 5 R: 4 N: 2 D: 1 C: 6 E: 1 Q: 2 G: 6 H: 0 I: 5 L: 5 K: 6 M: 2 F: 3 P: 2 S: 7 T: 0 W: 1 Y: 2 V: 4
Chemical Descriptors
64 reviewed residue count
C309H503N87O82S8 sequence-only estimate (linear, free termini)
7005.41 sequence-only estimate (linear, free termini)
9.78 sequence-only estimate (linear, free termini)
+8 sequence-only estimate (linear, free termini)
0.83 sequence-only estimate (linear, free termini)
0.272 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb