Back to search

Peptide record

TPDB49747

Antifungal standard
43 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB49747
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 43-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
QYGRRCCNWGPGRRYCKRWCMVQKGVVFGVLLILFICSTLTSA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C222H351N65O53S6
DEH
RCG
4970.99
10.00
7
0
18
+7
1.03
0.256
83.72
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
14230
2.86
14
Residue Composition
number
1
A
5
R
1
N
0
D
5
C
0
E
2
Q
5
G
0
H
2
I
4
L
2
K
1
M
2
F
1
P
2
S
2
T
2
W
2
Y
4
V
Amino Acid Distribution
A: 1 R: 5 N: 1 D: 0 C: 5 E: 0 Q: 2 G: 5 H: 0 I: 2 L: 4 K: 2 M: 1 F: 2 P: 1 S: 2 T: 2 W: 2 Y: 2 V: 4
Chemical Descriptors
43 reviewed residue count
C222H351N65O53S6 sequence-only estimate (linear, free termini)
4970.99 sequence-only estimate (linear, free termini)
10.00 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
1.03 sequence-only estimate (linear, free termini)
0.256 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb