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Peptide record

TPDB49745

Antifungal standard
62 amino acids
Basic Information
3D PDB MODEL
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TPDB49745
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 62-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
KRDPQQREYEDCRRRCEQQEPRQQYQCQRRCREQQMAINTSNLCSLLFLLSLFLLSTTVSLA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C315H518N102O99S6
GHW
Q
7510.56
8.47
10
7
18
+3
3.44
-0.908
70.81
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
3230
0.43
27
Residue Composition
number
2
A
9
R
2
N
2
D
5
C
5
E
10
Q
0
G
0
H
1
I
9
L
1
K
1
M
2
F
2
P
5
S
3
T
0
W
2
Y
1
V
Amino Acid Distribution
A: 2 R: 9 N: 2 D: 2 C: 5 E: 5 Q: 10 G: 0 H: 0 I: 1 L: 9 K: 1 M: 1 F: 2 P: 2 S: 5 T: 3 W: 0 Y: 2 V: 1
Chemical Descriptors
62 reviewed residue count
C315H518N102O99S6 sequence-only estimate (linear, free termini)
7510.56 sequence-only estimate (linear, free termini)
8.47 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
3.44 sequence-only estimate (linear, free termini)
-0.908 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb