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Peptide record

TPDB49742

Antifungal standard
72 amino acids
Basic Information
3D PDB MODEL
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TPDB49742
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 72-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
RQRDPQQQYEQCQERCQRHETEPRHMQTCQQRCERRYEKEKRKQQMAINTSNLCSLLFLLSLFLLSTTVSLA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C368H604N120O115S7
GW
Q
8774.00
8.80
14
8
19
+4
3.51
-1.118
60.97
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
3230
0.37
31
Residue Composition
number
2
A
9
R
2
N
1
D
5
C
7
E
12
Q
0
G
2
H
1
I
9
L
3
K
2
M
2
F
2
P
5
S
5
T
0
W
2
Y
1
V
Amino Acid Distribution
A: 2 R: 9 N: 2 D: 1 C: 5 E: 7 Q: 12 G: 0 H: 2 I: 1 L: 9 K: 3 M: 2 F: 2 P: 2 S: 5 T: 5 W: 0 Y: 2 V: 1
Chemical Descriptors
72 reviewed residue count
C368H604N120O115S7 sequence-only estimate (linear, free termini)
8774.00 sequence-only estimate (linear, free termini)
8.80 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
3.51 sequence-only estimate (linear, free termini)
-1.118 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb