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Peptide record

TPDB49736

Antifungal standard
88 amino acids
Basic Information
3D PDB MODEL
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TPDB49736
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 88-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
GSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCPMKLFLLTLLLVTLVITPSLIQTTMA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C415H692N114O121S14
W
CK
9663.59
8.73
16
6
27
+9
1.21
-0.064
75.34
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
5220
0.54
32
Residue Composition
number
3
A
3
R
2
N
3
D
12
C
3
E
1
Q
6
G
1
H
3
I
11
L
12
K
2
M
2
F
4
P
8
S
6
T
0
W
3
Y
3
V
Amino Acid Distribution
A: 3 R: 3 N: 2 D: 3 C: 12 E: 3 Q: 1 G: 6 H: 1 I: 3 L: 11 K: 12 M: 2 F: 2 P: 4 S: 8 T: 6 W: 0 Y: 3 V: 3
Chemical Descriptors
88 reviewed residue count
C415H692N114O121S14 sequence-only estimate (linear, free termini)
9663.59 sequence-only estimate (linear, free termini)
8.73 sequence-only estimate (linear, free termini)
+9 sequence-only estimate (linear, free termini)
1.21 sequence-only estimate (linear, free termini)
-0.064 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb