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Peptide record

TPDB49734

Antifungal standard
66 amino acids
Basic Information
3D PDB MODEL
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TPDB49734
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 66-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
QQCGRQAGNRRCPNNLCCSQFGYCGRTNEYCCTGFGCQSNCRRCGMKYLWVFIVFSIAVLSLACSA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C309H480N96O89S12
DH
C
7348.52
8.39
7
1
22
+6
1.50
0.009
54.70
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
10595
1.44
31
Residue Composition
number
4
A
6
R
5
N
0
D
11
C
1
E
5
Q
7
G
0
H
2
I
4
L
1
K
1
M
4
F
1
P
5
S
2
T
1
W
3
Y
3
V
Amino Acid Distribution
A: 4 R: 6 N: 5 D: 0 C: 11 E: 1 Q: 5 G: 7 H: 0 I: 2 L: 4 K: 1 M: 1 F: 4 P: 1 S: 5 T: 2 W: 1 Y: 3 V: 3
Chemical Descriptors
66 reviewed residue count
C309H480N96O89S12 sequence-only estimate (linear, free termini)
7348.52 sequence-only estimate (linear, free termini)
8.39 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
1.50 sequence-only estimate (linear, free termini)
0.009 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb