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Peptide record

TPDB49732

Antifungal standard
55 amino acids
Basic Information
3D PDB MODEL
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TPDB49732
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 55-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
AGECVQGRCPSGMCCSQFGYCGRGPKYCGRMVNMKSVALIVIVMMAFMMVDPSMG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C247H401N69O69S14
HTW
GM
5890.16
8.31
5
2
24
+3
0.34
0.484
58.36
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
3355
0.57
15
Residue Composition
number
3
A
3
R
1
N
1
D
6
C
1
E
2
Q
8
G
0
H
2
I
1
L
2
K
8
M
2
F
3
P
4
S
0
T
0
W
2
Y
6
V
Amino Acid Distribution
A: 3 R: 3 N: 1 D: 1 C: 6 E: 1 Q: 2 G: 8 H: 0 I: 2 L: 1 K: 2 M: 8 F: 2 P: 3 S: 4 T: 0 W: 0 Y: 2 V: 6
Chemical Descriptors
55 reviewed residue count
C247H401N69O69S14 sequence-only estimate (linear, free termini)
5890.16 sequence-only estimate (linear, free termini)
8.31 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
0.34 sequence-only estimate (linear, free termini)
0.484 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb