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Peptide record

TPDB49730

Antifungal standard
115 amino acids
Basic Information
3D PDB MODEL
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TPDB49730
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 115-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
AIGCNTVASKMAPCLPYVTGKGPLGGCCGGVKGLIDAARTTPDRQAVCNCLKTLAKSYSGINLGNAAGLPGKCGVSIPYQISPNTDCSKVHMAALIKLMCTMLIVAAVVAPLAEA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C500H838N138O147S13
FW
A
11551.77
8.58
11
4
50
+6
0.07
0.491
97.65
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
4970
0.43
32
Residue Composition
number
16
A
2
R
5
N
3
D
9
C
1
E
2
Q
13
G
1
H
7
I
11
L
8
K
4
M
0
F
8
P
6
S
7
T
0
W
3
Y
9
V
Amino Acid Distribution
A: 16 R: 2 N: 5 D: 3 C: 9 E: 1 Q: 2 G: 13 H: 1 I: 7 L: 11 K: 8 M: 4 F: 0 P: 8 S: 6 T: 7 W: 0 Y: 3 V: 9
Chemical Descriptors
115 reviewed residue count
C500H838N138O147S13 sequence-only estimate (linear, free termini)
11551.77 sequence-only estimate (linear, free termini)
8.58 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
0.07 sequence-only estimate (linear, free termini)
0.491 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb