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Peptide record

TPDB49726

Antifungal standard
115 amino acids
Basic Information
3D PDB MODEL
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TPDB49726
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 115-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
AITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAYNAGRAAGIPSRCGVSVPYTISASVDCSKIHMARTAATKLALVALVAAMLLVAADA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C475H804N144O148S10
EFW
A
11221.09
9.48
13
3
53
+9
0.53
0.487
89.39
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
4970
0.44
34
Residue Composition
number
26
A
6
R
1
N
3
D
8
C
0
E
2
Q
11
G
1
H
4
I
9
L
6
K
2
M
0
F
4
P
13
S
7
T
0
W
3
Y
9
V
Amino Acid Distribution
A: 26 R: 6 N: 1 D: 3 C: 8 E: 0 Q: 2 G: 11 H: 1 I: 4 L: 9 K: 6 M: 2 F: 0 P: 4 S: 13 T: 7 W: 0 Y: 3 V: 9
Chemical Descriptors
115 reviewed residue count
C475H804N144O148S10 sequence-only estimate (linear, free termini)
11221.09 sequence-only estimate (linear, free termini)
9.48 sequence-only estimate (linear, free termini)
+9 sequence-only estimate (linear, free termini)
0.53 sequence-only estimate (linear, free termini)
0.487 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb