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Peptide record

TPDB49724

Antifungal standard
52 amino acids
Basic Information
3D PDB MODEL
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TPDB49724
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 52-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
KSCCPNTTGRNIYNTCRLGGGSRERCASLSGCKIISASTCPSDYPKFRNVES
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C229H376N74O77S6
QHMW
S
5590.31
8.88
8
3
11
+5
2.51
-0.588
46.92
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
3355
0.60
24
Residue Composition
number
2
A
5
R
4
N
1
D
6
C
2
E
0
Q
5
G
0
H
3
I
2
L
3
K
0
M
1
F
3
P
8
S
4
T
0
W
2
Y
1
V
Amino Acid Distribution
A: 2 R: 5 N: 4 D: 1 C: 6 E: 2 Q: 0 G: 5 H: 0 I: 3 L: 2 K: 3 M: 0 F: 1 P: 3 S: 8 T: 4 W: 0 Y: 2 V: 1
Chemical Descriptors
52 reviewed residue count
C229H376N74O77S6 sequence-only estimate (linear, free termini)
5590.31 sequence-only estimate (linear, free termini)
8.88 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.51 sequence-only estimate (linear, free termini)
-0.588 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb