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Peptide record

TPDB49723

Antifungal standard
72 amino acids
Basic Information
3D PDB MODEL
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TPDB49723
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 72-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
KSCCPNTTGRNIYNACRLTGAPRPTCAKLSGCKIISGSTCPSDYPKMEVVRGSSLVLLVLLLGALLVSQVES
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C324H550N92O99S7
HFW
L
7542.91
8.87
8
3
26
+5
0.87
0.264
100.14
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
3355
0.44
26
Residue Composition
number
4
A
4
R
3
N
1
D
6
C
2
E
1
Q
6
G
0
H
3
I
10
L
4
K
1
M
0
F
5
P
9
S
5
T
0
W
2
Y
6
V
Amino Acid Distribution
A: 4 R: 4 N: 3 D: 1 C: 6 E: 2 Q: 1 G: 6 H: 0 I: 3 L: 10 K: 4 M: 1 F: 0 P: 5 S: 9 T: 5 W: 0 Y: 2 V: 6
Chemical Descriptors
72 reviewed residue count
C324H550N92O99S7 sequence-only estimate (linear, free termini)
7542.91 sequence-only estimate (linear, free termini)
8.87 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
0.87 sequence-only estimate (linear, free termini)
0.264 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb