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Peptide record

TPDB49720

Antifungal standard
60 amino acids
Basic Information
3D PDB MODEL
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TPDB49720
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 60-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
KSCCRSTLGRNCYNLCRVRGAQKLCAGVCRCKLTSSGKCPTGMVCLLILGLVLEQVQVEG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C267H466N84O78S10
DHFW
CL
6421.75
8.81
9
2
20
+7
1.07
0.305
97.33
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
1990
0.31
22
Residue Composition
number
2
A
5
R
2
N
0
D
9
C
2
E
3
Q
7
G
0
H
1
I
9
L
4
K
1
M
0
F
1
P
4
S
3
T
0
W
1
Y
6
V
Amino Acid Distribution
A: 2 R: 5 N: 2 D: 0 C: 9 E: 2 Q: 3 G: 7 H: 0 I: 1 L: 9 K: 4 M: 1 F: 0 P: 1 S: 4 T: 3 W: 0 Y: 1 V: 6
Chemical Descriptors
60 reviewed residue count
C267H466N84O78S10 sequence-only estimate (linear, free termini)
6421.75 sequence-only estimate (linear, free termini)
8.81 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
1.07 sequence-only estimate (linear, free termini)
0.305 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb