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Peptide record

TPDB49719

Antifungal standard
72 amino acids
Basic Information
3D PDB MODEL
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TPDB49719
Antifungal
Anti-infective peptides
CAFPdb
standard
No
A 72-aa standard-residue antifungal peptide sequence curated from CAFPdb, with an available 3D structural model.
Sequence
KSCCRTTLGRNCYNLCRSRGAQKLCSTVCRCKLTSGLSCPKGFPKMGSKGLKGVMVCLLILGLVLEQVQVEG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C327H567N99O93S11
DHW
L
7726.37
9.59
12
2
23
+10
1.04
0.172
90.56
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
1990
0.26
25
Residue Composition
number
1
A
5
R
2
N
0
D
9
C
2
E
3
Q
9
G
0
H
1
I
11
L
7
K
2
M
1
F
2
P
6
S
4
T
0
W
1
Y
6
V
Amino Acid Distribution
A: 1 R: 5 N: 2 D: 0 C: 9 E: 2 Q: 3 G: 9 H: 0 I: 1 L: 11 K: 7 M: 2 F: 1 P: 2 S: 6 T: 4 W: 0 Y: 1 V: 6
Chemical Descriptors
72 reviewed residue count
C327H567N99O93S11 sequence-only estimate (linear, free termini)
7726.37 sequence-only estimate (linear, free termini)
9.59 sequence-only estimate (linear, free termini)
+10 sequence-only estimate (linear, free termini)
1.04 sequence-only estimate (linear, free termini)
0.172 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb